You rightly mention Pasatiempo as a whole, but #16 has to be called out individually. When standing at the bottom of that 3-tiered green, you can't see the top. #18 there is also particularly vicious.
The sandscrapes at Elmore GG in Victoria, Australia are outrageous for speed, small footprints and reads.
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Broadmoor east course, hole #8 or #9.
Couldn't agree more about Yale. If an architect built a course like Yale today, the members would tell him to blow it up and start over. Which would be a shame, because it is one of the most unique and fun golf courses you could ever hope to play!
I think consideration has to given to adding the Hill Course at French Lick, IN. There are NO flat surfaces there.
Maggie Valley Golf Course near Asheville, NC. I haven't been there in a few years, so I don't know if the greens are still this way. Almost all of the holes have severe slopes and when they cut them low, I've seen 20-30' putts go up to the hole and then come back to the player and sometimes even off the green. They're practically unfair at times.
#2, Par 3 at Prairie Dunes CC. Back left pin placement
#15,Par 5 same course. Anywhere is brutal
Seminole. Even the holes not on the ridge are fast and difficult.
Ballyneal. In 18 holes you will have 2 miles of putts to make. Off the chart hard, every hole.